Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015797084.1_cds_XP_016453281.1_4702
CDS Infomation

[gene=LOC107777697] [db_xref=GeneID:107777697] [protein=upstream activation factor subunit UAF30-like] [protein_id=XP_016453281.1] [location=join(2768..3111,7092..7206,7303..7477,8313..8408,8708..8874,10962..11087)] [gbkey=CDS]
Sequence

ATGGTATCGGACTCGGAACTCGTCGGCCGGCTGCGTGAGTTCCTAAGCACCTCCGACCTC
ACCACCACCACCACCACTGCCGTCCGACGAAAGCTCGAAGAGGACTTCGGTATCGATTTA
TCCGATAAAAAGGCCTTCATTCGAGAACAAGTTGATCTTTATCTTGAAAGCCAGTTTCAA
CTTGAACAGCAGAAAAATGAAGGAGAAATGCACGACGAAGTCGATGACGGACCGCCGGCG
GAAGTGAGTGACGAAGAAGAAGATGCGGCGGAGGAGGAAGAAGAAGAAGAGCAAGAGGAA
TCTGAAGCTGTTACTAAAGTAAAACGAAGAAGTTCTAAGAAAAAGTCTGGGAAGAAGAAT
GAAAATGTTAGAAGGAAAGCTGGTGGATTTACCAAAATATGTAGCCTTTCTCCCCAACTT
CAAAAATTTACTGGGGAAGCAGAACTTGCAAGGACTGAGGTGGTGAAGAGGATGTGGAAC
TATATTCGTGAAAATGATTTGCAAGAGCCGTCAAATAGGCGGAATATAAACTGTGATGAC
ACATTACGAGAGCTTTTTGGTGTGGATAAAATAGACATGTTTCAAATGAACAAGGCCCTG
GCAAAGCATATTTGGCCCTTGGATTCTGATGGTGTTTCCACAATAACAACTTCTGGTTCG
GTAAATTCTACTGCGAGGGAAAAAAATTCTACGGCAAAGAAAAAGCGGCAGAAGCAAGAG
GAGGATGAAGATTCAGATGAGCCAAAGAGAAAGGAAAAGCGGCACAACTCTGGAATTCTT
GCTCCACTCCAGCTTTCTGATGCCTTAATAAAGTTCCTCGGTACAGGAGAGAGTGAACTG
CCACGAGGCAATGTTGTTAAAAGAATTTGGGATTACATTAAGCAAAATAACTTGCAGGAT
CCGTCTGACAAGAGGAAAATAATATGTGATGAGAAGTTGAAAGAACTATTTGATGTTGAT
ACCTTCACGGGATTTGGAGTATCAAAACTACTTACTGCACATTTTATTAAGGTGGAACGG
TGA

Peptide Sequence

PEP ID

XP_016453281.1
PEP Infomation

PREDICTED: upstream activation factor subunit UAF30-like [Nicotiana tabacum]
Sequence

MVSDSELVGRLREFLSTSDLTTTTTTAVRRKLEEDFGIDLSDKKAFIREQVDLYLESQFQ
LEQQKNEGEMHDEVDDGPPAEVSDEEEDAAEEEEEEEQEESEAVTKVKRRSSKKKSGKKN
ENVRRKAGGFTKICSLSPQLQKFTGEAELARTEVVKRMWNYIRENDLQEPSNRRNINCDD
TLRELFGVDKIDMFQMNKALAKHIWPLDSDGVSTITTSGSVNSTAREKNSTAKKKRQKQE
EDEDSDEPKRKEKRHNSGILAPLQLSDALIKFLGTGESELPRGNVVKRIWDYIKQNNLQD
PSDKRKIICDEKLKELFDVDTFTGFGVSKLLTAHFIKVER

Transcript Sequence

Gene sequence data has not been registered.